Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTGCAACAGTGTGCCAGT
..(((((((((..(((((....&)))))...))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002112
GeneSymbolHDC
Binding site1860,1878
Score0.846
Seed1
Au0.397
Energy-17.7
Binding len18
Me-9.593
Phylopstem-0.6541291777777778
Phylopflank-0.09208590749999997
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure