Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGAGGGAGTTACACTCAGGCTGCAAGCAGTGACAGTGCCCAGGGCTCTG
((((((((((((((((((.((&)).)))).........)))))))).................))).))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_002116
GeneSymbolHLA-A
Binding site1042,1091
Score0.846
Seed1
Au0.456
Energy-23.7
Binding len49
Me-3.938
Phylopstem0.9303872088888888
Phylopflank1.6958192849999996
Longest consecutive pairings8
Position of longest consecutive pairings25
Pairings in 3prime end7
PositionCDS
2D Structure