Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGAAAAGGAGGGAGCTGCTCTCAGGCTGCGTGCAGCAACAGTGCCCAGGGCTCTG
((((((((((((((((((.((&.)).)))).........))))))).................)))).))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_002117
GeneSymbolHLA-C
Binding site1035,1093
Score0.846
Seed1
Au0.441
Energy-23.9
Binding len50
Me-3.938
Phylopstem-0.00019697333333334516
Phylopflank-0.17323722562500002
Longest consecutive pairings7
Position of longest consecutive pairings26
Pairings in 3prime end7
PositionCDS
2D Structure