Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGAGGATCACTTGAGGCCAGGAGTTTG
((((((((..(((((((((((&)))))))..........)))))))).)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_002128
GeneSymbolHMGB1
Binding site4921,4952
Score0.923
Seed1
Au0.412
Energy-23.9
Binding len31
Me-6.236
Phylopstem0.30812077142857136
Phylopflank-0.07164732625
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end8
Position3UTR
2D Structure