Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACAGTGTGAAGTTAGAATTCCTTCAGGGTGATGCCAGGTT
(((((((((((..((.((....&.)).))..))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002136
GeneSymbolHNRNPA1
Binding site1433,1473
Score1.0
Seed1
Au0.603
Energy-19.5
Binding len21
Me-8.807
Phylopstem1.8633506166666665
Phylopflank3.1015241525000006
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure