Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGAGGTGGTGGTGGGTG
..((((..((.((((((((((&))))))))).).))..)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_002136
GeneSymbolHNRNPA1
Binding site2383,2404
Score0.885
Seed0
Au0.397
Energy-27.0
Binding len21
Me-11.639
Phylopstem0.7270572727272727
Phylopflank1.426522645
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end8
Position3UTR
2D Structure