Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCACGCATACTCTTTGTGACCACAGGGTTGCAGG
(((((((((((..((((((((&))))))))))))...................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017022132
GeneSymbolFMN1
Binding site2644,2683
Score0.846
Seed1
Au0.544
Energy-19.6
Binding len39
Me-8.574
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings27
Pairings in 3prime end8
Position3UTR
2D Structure