Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTGGCATTGATGCCTGCCAGGG
.(((((((((((((((......&.)))))).))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002151
GeneSymbolHPN
Binding site1273,1297
Score0.923
Seed1
Au0.353
Energy-18.7
Binding len20
Me-3.793
Phylopstem4.026144444444444
Phylopflank4.037005862500001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure