Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGCTGGCTGCAGGA
....(((((((((....(((.&)))..))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_002154
GeneSymbolHSPA4
Binding site4349,4364
Score1.0
Seed0
Au0.529
Energy-21.7
Binding len15
Me-11.372
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure