Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTATCGTGTCTCAGTGCAGCCGAGGCAGAGCCTTTGAAGGATGCGAT
((((((((.((((((((((((&))))..............)))))))).)))...............))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001345918
GeneSymbolWDR53
Binding site410,461
Score0.808
Seed1
Au0.5
Energy-18.3
Binding len51
Me-4.994
Phylopstem-0.2855249
Phylopflank-0.15203036625000002
Longest consecutive pairings8
Position of longest consecutive pairings25
Pairings in 3prime end8
Position5UTR
2D Structure