Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGGGAAAGAGCTAGA
..(((((((.(((((((((...&))))))))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_017022283
GeneSymbolSCAPER
Binding site2207,2225
Score0.981
Seed1
Au0.441
Energy-25.4
Binding len18
Me-6.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end5
PositionCDS
2D Structure