Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTGTGGAGGGCAGCCAGA
..((((((((((((..(((((.&)))))..)))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_017022283
GeneSymbolSCAPER
Binding site3373,3394
Score0.846
Seed1
Au0.456
Energy-25.0
Binding len21
Me-5.925
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure