Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCTGGCGTGCAACTACCCACAGCCTCTCCCCACCACTTTCTGGCAGCTGCAT
.(((((((((((((((..(((&.))).))))))..................))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017022283
GeneSymbolSCAPER
Binding site3669,3724
Score0.923
Seed1
Au0.412
Energy-24.3
Binding len39
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure