Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGCCCCTGCTGTGTGTCAGGC
.(((((((((((..((((....&.))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002207
GeneSymbolITGA9
Binding site5687,5709
Score1.0
Seed1
Au0.456
Energy-21.1
Binding len17
Me-5.939
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure