Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCTGCAATGGCCGGGG
.((((((...((.(((((((((&))))))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002211
GeneSymbolITGB1
Binding site1899,1918
Score0.846
Seed1
Au0.456
Energy-20.6
Binding len19
Me-9.695
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end8
PositionCDS
2D Structure