Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCACCGCCGATGCCAGGG
.((((((((.............&.)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002220
GeneSymbolITPKA
Binding site1588,1606
Score0.846
Seed1
Au0.265
Energy-15.5
Binding len10
Me-14.322
Phylopstem4.411894125
Phylopflank1.8983698700000007
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure