Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAACCTTGCCAGGG
.(((((((.....(((((....&)))))....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002240
GeneSymbolKCNJ6
Binding site4094,4111
Score0.846
Seed1
Au0.368
Energy-18.8
Binding len17
Me-13.553
Phylopstem-0.18615102857142857
Phylopflank-0.29811072499999997
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure