Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCCCGCGGCTCAGG
(((.((((((((..((.((((&))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001345928
GeneSymbolSHCBP1L
Binding site247,265
Score0.846
Seed0
Au0.176
Energy-19.9
Binding len18
Me-9.116
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure