Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATCTATATTGTCTACAGAGTAAATCAGGTA
((((((..(((..(((((((..&.)))))))..)))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002358
GeneSymbolMAD2L1
Binding site5003,5034
Score0.846
Seed0
Au0.706
Energy-18.5
Binding len22
Me-12.431
Phylopstem0.3046212857142857
Phylopflank0.6149445921249999
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end6
Position3UTR
2D Structure