Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATTCGTTTGTGTGCCAGT
..(((((((((((.........&.))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002380
GeneSymbolMATN2
Binding site1881,1901
Score0.923
Seed1
Au0.588
Energy-17.8
Binding len13
Me-6.782
Phylopstem-0.7873390000000001
Phylopflank-0.24686183375
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure