Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGGGGGGTGGCCAGGC
.((((((.(((..(.((((...&)))).)..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002409
GeneSymbolMGAT3
Binding site2505,2523
Score0.846
Seed1
Au0.353
Energy-18.5
Binding len18
Me-11.478
Phylopstem2.011085
Phylopflank1.1389653062500003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure