Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGGAATATTGCCGGGTG
((((((((.....(.((((...&)))).)....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002430
GeneSymbolMN1
Binding site5690,5709
Score0.923
Seed1
Au0.632
Energy-16.4
Binding len19
Me-14.433
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure