Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGCCGCAGCGGGATGCC
..((((((((((((...((((&)))))))))))))....))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017023264
GeneSymbolAMDHD2
Binding site1271,1292
Score0.846
Seed1
Au0.294
Energy-20.7
Binding len21
Me-5.925
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure