Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCTGCAATGAAGACTCTAGCCAGTCTCTTTTCCACGTATGCTAGT
..((((((((((.(((((((((&))))))))).)...........................))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002472
GeneSymbolMYH8
Binding site1934,1982
Score0.846
Seed1
Au0.515
Energy-16.3
Binding len48
Me-6.246
Phylopstem2.8765934864864864
Phylopflank3.3487074462499997
Longest consecutive pairings9
Position of longest consecutive pairings39
Pairings in 3prime end8
PositionCDS
2D Structure