Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAGCCAAATCACCTCTACTGCCGTAGCAAACACTGTGTAAG
(((((((((((((.(((((((&.)))).))).))))))))........))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001345929
GeneSymbolVWC2L
Binding site303,347
Score0.846
Seed1
Au0.515
Energy-21.6
Binding len32
Me-4.794
Phylopstem2.1447736190476188
Phylopflank1.8806213625
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end7
Position5UTR
2D Structure