Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTACAGCCGGGG
.((((((......(((((((..&))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002478
GeneSymbolMYOD1
Binding site116,130
Score0.846
Seed1
Au0.397
Energy-16.9
Binding len14
Me-15.867
Phylopstem3.7054100000000005
Phylopflank1.70357322
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure