Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGCAGCCGACAATGAAATCTTGGCAGCTAATTGCAGT
(((((((((((((((((((((&)))))))))))...............))))))....)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017023322
GeneSymbolRBFOX1
Binding site99,140
Score1.0
Seed1
Au0.529
Energy-23.0
Binding len41
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings30
Pairings in 3prime end8
Position5UTR
2D Structure