Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTCAGCCCAAGCGGCTGCAT
.((((((((((((((..(((.&))))))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017023332
GeneSymbolRBFOX1
Binding site1580,1601
Score0.846
Seed1
Au0.471
Energy-21.9
Binding len21
Me-4.026
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure