Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAGAATATGAAGCTGAATTGGAGACGCAGCTGCAAC
(((((((((((..(.(((...&.))).)..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017023355
GeneSymbolNDE1
Binding site220,259
Score0.949
Seed1
Au0.515
Energy-22.8
Binding len20
Me-9.309
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure