Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGTGTTGTGTGCCGAGTG
((.((((((((((((((((...&)))))))))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002522
GeneSymbolNPTX1
Binding site3481,3501
Score0.923
Seed0
Au0.382
Energy-20.3
Binding len20
Me-5.495
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings16
Position of longest consecutive pairings4
Pairings in 3prime end5
Position3UTR
2D Structure