Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTGCGGTGCCAGGTG
(((((((((.....((((....&))))....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002529
GeneSymbolNTRK1
Binding site703,721
Score0.923
Seed1
Au0.25
Energy-20.4
Binding len18
Me-13.498
Phylopstem4.853974444444444
Phylopflank2.43071549875
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure