Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGGCTGCACTCACTTCCTTC&GGAGGAGGTAACATAGATGCCTGGGCCTGATGGTGGGGCCATA
((((((.((((.(((((((((&)))))))))......................)))).)))))).
Details
MiRNAhsa-miR-647
RefseqIDNM_001330410
GeneSymbolSFXN5
Binding site2368,2411
Score0.923
Seed0
Au0.397
Energy-23.9
Binding len43
Me-8.828
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings34
Pairings in 3prime end8
Position3UTR
2D Structure