Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGAGCGGGAGTAACCTGACCGTGAAGGTTGCAT
.(((((((((((((...((((&.))))))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001345934
GeneSymbolLCN8
Binding site180,217
Score0.923
Seed1
Au0.5
Energy-19.7
Binding len22
Me-4.762
Phylopstem-0.5930084624999999
Phylopflank-0.05431669750000012
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure