Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATTCCTGACTGTGAGCCAGGC
.((((((.((((((((((....&)))))).......)))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002570
GeneSymbolPCSK6
Binding site2517,2542
Score0.923
Seed1
Au0.441
Energy-20.2
Binding len25
Me-6.107
Phylopstem3.505745647058824
Phylopflank3.2322412574999997
Longest consecutive pairings6
Position of longest consecutive pairings19
Pairings in 3prime end4
PositionCDS
2D Structure