Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCCAGAGCATGATGTGCCAGT
..((((((((..((((......&.))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002571
GeneSymbolPAEP
Binding site439,461
Score0.846
Seed1
Au0.397
Energy-17.0
Binding len16
Me-11.129
Phylopstem2.679916625
Phylopflank3.5773415374999993
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure