Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTTACAATTGTATGCTAA
...(((((((((((((((((..&))))))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002572
GeneSymbolPAFAH1B2
Binding site3816,3835
Score0.923
Seed0
Au0.662
Energy-18.4
Binding len19
Me-6.515
Phylopstem4.021783427777778
Phylopflank2.1816873975
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure