Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCTTGGCACTACAGTCATAAATAGAAAACACTGTGTGTGCTCAGGG
.(((((((((((..((......&.))..))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002585
GeneSymbolPBX1
Binding site4052,4101
Score1.0
Seed1
Au0.544
Energy-18.6
Binding len18
Me-5.939
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings6
Pairings in 3prime end2
Position3UTR
2D Structure