Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTACAGCATTGCAGGTG
((((.(((.....((((((((.&))))))))....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002587
GeneSymbolPCDH1
Binding site2403,2423
Score0.846
Seed0
Au0.485
Energy-16.8
Binding len20
Me-17.816
Phylopstem5.4814966
Phylopflank4.836648375125002
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end7
PositionCDS
2D Structure