Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATTGTTTCAGGTG
((((((...(((((((((....&))))))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002600
GeneSymbolPDE4B
Binding site4394,4411
Score1.0
Seed0
Au0.662
Energy-18.7
Binding len17
Me-8.851
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end4
Position3UTR
2D Structure