Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTACAACTGTAAGCCAGGA
.((((((.((((.(((((....&)))))..)))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002600
GeneSymbolPDE4B
Binding site683,702
Score0.923
Seed1
Au0.529
Energy-18.4
Binding len19
Me-7.396
Phylopstem-0.12454335
Phylopflank-0.1715201475
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure