Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTGTGTACTGCACAAGGACATTGTATGCAGGG
.(((.(((((((((((......&.)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002608
GeneSymbolPDGFB
Binding site2731,2765
Score1.0
Seed0
Au0.529
Energy-20.3
Binding len16
Me-7.912
Phylopstem0.7561395454545454
Phylopflank0.1483673175
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure