Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTCATTGTCCCCAGCCCAGTGGGCATTGGAGGTGCCAGGG
.((((((((.((((((......&.))))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002609
GeneSymbolPDGFRB
Binding site5333,5375
Score0.923
Seed1
Au0.353
Energy-21.5
Binding len19
Me-5.036
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure