Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACATCTTTGTGCCAGA
..((((((((..(((((((...&)))))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002609
GeneSymbolPDGFRB
Binding site801,820
Score0.846
Seed1
Au0.441
Energy-20.1
Binding len19
Me-11.129
Phylopstem0.10261111249999999
Phylopflank-0.2693314437499999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure