Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAATTGCAACGTAGCTGTCATCAACGTGGGGGCACCCGCGGCTGGGAT
((.(((((((((.(((.....&.))).))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001345944
GeneSymbolPFKP
Binding site1313,1363
Score0.846
Seed0
Au0.324
Energy-22.9
Binding len18
Me-6.784
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end3
PositionCDS
2D Structure