Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAAAGGTGCTGCCCTAGTACTTTTCTTTGCTGCCTCTGCTGCT
..(((((.(.(((.((((((.&.)))))).))).).))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017023704
GeneSymbolPSME3IP1
Binding site1769,1815
Score0.923
Seed0
Au0.515
Energy-20.2
Binding len20
Me-9.37
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings13
Pairings in 3prime end6
Position3UTR
2D Structure