Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTGTTTTGTTGCCAGGC
.(((((((.((((.........&.))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002677
GeneSymbolPMP2
Binding site3390,3408
Score0.923
Seed1
Au0.662
Energy-15.9
Binding len13
Me-6.675
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure