Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACGCGGAGAGCCAGGTA
(((((((...(..(((((....&)))))..)...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002727
GeneSymbolSRGN
Binding site140,159
Score0.846
Seed1
Au0.471
Energy-17.3
Binding len19
Me-13.186
Phylopstem0.4214129714285714
Phylopflank-0.046955082499999995
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure