Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTCCTCAGAGTAGCCGGGTT
(((((((.(((..((..(((((&)))))..))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002737
GeneSymbolPRKCA
Binding site4320,4342
Score0.923
Seed1
Au0.515
Energy-19.0
Binding len22
Me-11.12
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure