Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCAGATGTGGCCAGGA
.((((((.((((.((((.....&))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002742
GeneSymbolPRKD1
Binding site1909,1926
Score0.923
Seed1
Au0.426
Energy-18.1
Binding len17
Me-7.396
Phylopstem-0.157567122
Phylopflank0.5626669977750002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure