Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGTGACCTTGGCTGTT
..(((((((.(((((((((((&))))))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017023797
GeneSymbolABCC11
Binding site3285,3305
Score0.846
Seed1
Au0.471
Energy-21.0
Binding len20
Me-6.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end8
PositionCDS
2D Structure